Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QGSICRMTQDGLTACKPSVS----GQS-PLPP-----------SPACCAAISKA--DLPCLCSFKNSALLPY---L-G--I--D-PNMATQLPAKCNIVTSTHC
1W2Q Chain:A ((22-113))
--------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRA----
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24079 for 380 contacts (-63.4/contact) +
2D Compatibility (PS) -6744 + (NN) -1584 + (LL) 664
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -36343.0 ( -95.64 by residue)
QMean score : 0.322
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: