Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EEKAACVVTDLKACLPDIIGETPPSTKCCTKLKDK--K-SCFCEYLKNPLIAPY------------MTSAKQVLEACGVPVP-VCQRF
3OB4 Chain:A ((427-488))
-----------------------HQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC---
General information:
TITO was launched using:
RESULT:
Template:
3OB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18394 for 248 contacts (-74.2/contact) +
2D Compatibility (PS) -4664 + (NN) 175 + (LL) 1980
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -23453.0 ( -94.57 by residue)
QMean score : 0.403
(partial model without unconserved sides chains):
PDB file :
Tito_3OB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OB4-query.scw
PDB file :
Tito_Scwrl_3OB4.pdb
: