Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---AP-IKVAGGVGNCEKDMQWCID--KTEFFTHGYIYERCCYNMIMKK--KCMCLFLKSPKLKIAARNVN----------NAC--------GRGGLPKDAFSEFKC--
2HFT Chain:? ((107-218))
NLGQPTIQSFEQVGT---KVNVTVEDERTLVRRNNTFLS---LRDVFGKDLIYTLYYWKSSGKKTAKTNTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECMG
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23347 for 350 contacts (-66.7/contact) +
2D Compatibility (PS) -7950 + (NN) 3008 + (LL) 436
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -31953.0 ( -91.29 by residue)
QMean score : 0.201
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: