Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFVIATFYHFVKLSNYYDMKDEIKAACDNFELKGTILLAEEGINATISGERNAINKIFNFLCSDYRLKDLTWKESAAKYQPFSKMKVRLKREIVNLGVSNLDTSLRGKYIDPDHWDDFISQPDVLVIDTRNEYEVKLGKFKNAINPYIQYFREFPQWAKSFSKNKNLKVAMYCTGGIRCEKSTAYMKSLGFNDVYHLKGGILSYLERTHNKNGNWEGECFVFDDRIAINSSLAPSNKIKCIFCSNQVSADELKSVSRGQVVCSDCNPS |
| 3GK5 Chain:A ((102-196)) | ------------------------------------------------------------------------------------------------------------RSINAADLYENI--KAYTVLDVREPFELIFGSIANSINIPISELREKWKI-----LERDKKYAVICAHGNRSAAAVEFLSQLGLN-IVDVEGGIQSWIEEGYP---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42486 for 702 contacts (-60.5/contact) +
2D Compatibility (PS) -10320 + (NN) -3226 + (LL) 10860
1D Compatibility (HY) -7200 + (ID) 1300
Total energy: -53672.0 ( -76.46 by residue)
QMean score : 0.428
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