Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLNFNASFSNLYTRNGLIKLDEAFLDYIKSCDEDLFCSLIEAREETTPSSASFQYWTSESRKKEPVSSKNTASSSVSFQCATLESRKHPMSASQMTDSQLIIDLAYLLDGFIAKLFNVEKEIEELKKKHNDFAVIYKCKRLFVQRYALKKYADTENIDIDYVTSELNCFLTLPTTEKIFAEQVMHWFEDRENHKDEIELAAQYAAWRVKNKRSILFNIHRKIDHENLISFSKKEVDKVEVLYSNKIKRRYGFDLTSEKVSLDKALDNAHYCIFCHKQNKDSCSKGLLETSLSFQHMTLKSKKKEEWIPVSSTGMTGKCTQMSEGCIKSLLNNYNTFKRSPLKVELHGCPLEQKISEMNLVKSEG-YNIASLAIAMIDNPLCA---ATGY----KICNDCMNSCIYQ-K-QEPVNVPMVETRILDDVLSLPYGFEIYSLLSRWNPLNFQQPLPKENTGKNVLVVGLGPAGFNLAHHLLNDGHNVIAIDGLKIEPLNDDLQPIKDFKHEKLSERIADGFGGVAEYG--IT-SRWDKNYLKIIRLLLERRENFAIYGGIRFCGTVTVDDAFNLGFNHIALALGSGKPRMIKIKNILA---RGVRMASDFLMSLQLTGALKLDSLANLQVRMPIVIIGAG--LTAIDTATEALAYYPIQAEKFLLRYEVLVDKYGKDYVEKDWTEEEREIADEFISHAQLICKEKELAKKENREAKILELMQSLGGVKVVYRKELK--DS-PSYRLNSEEVQNA-LSEGIYFIENSEPVEIMTDKYSHIESIKLIDTKSHEIKYIKARSILIAAGTEPNTVIATEDKKHFKLSNGYFTHLNSLGEEIDPILSPKMQNKDRILVYKQGGRTISFFGDLHPSYSGSVVKAMASAKNGYPIISQLLSGANTATVIPISSPITSVLNTGISASHTQLYECYNIRVTFITKDVISVPRHTAIQTLWLKSNLHQKGYHSSSSFLSPQCVTLGFSKIGYKQTQYATFSAKLTKNWTPVLRTGMTLSHRTNEEFFNRIKEQFTAKVVKVQYLTDKVVEVVIKAPLAAKNFQPGQFFRLQNFETNSRKINNTTFAMEGIAVTGTEVNKKKGLISTIVLETGGSTNLCRYLREGEQIILMGPTGRPTEVY |
| 3K30 Chain:A ((306-678)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGRLNLIRECIGCN-ICVSGDLTMSPI----------RCTQNPSMGEEWR---RGWHPE----RIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRD-------------------------LGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRE----SPMTGDDIVEFGFEHVITATGA-TWRTDGVARFHTTALPI-AEGMQVLGPDDL---FA----GRLPDGKKVVVYDDDHYYLGGVVAELLAQK-GYE-------------------------------------------------------------------VSIVTPGAQVSSWTNNTF--EVNRIQRRLIENGVARVTDHAVVAVGAG------GVTVRDTYASIERELECDAVVMVTARLPREELYLDLV--AR---------RD----------------------AGEIASVRGIGDAWA--PGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRREVTQLA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162468 for 2905 contacts (-55.9/contact) +
2D Compatibility (PS) -37634 + (NN) -9068 + (LL) 53884
1D Compatibility (HY) -6800 + (ID) 3000
Total energy: -165086.0 ( -56.83 by residue)
QMean score : 0.414
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