Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELISNLIHQLGGGIYNFLSFSLIISVIVFVHEYGHYIIAKAYKVKVESFSIGFGPGIFGFYDKSGTRWKLSAIPLGGYVKMLGDNNAANTPIDQQELTEEEKSYSLHTKPRYQKAAIVFAGPFANMIFAIIALTVFFSVVGYYHTPPVIGKVIEGSAAKQAGLLPGDTITQINEYKIKYFEDISRVMMSNPETKIEIKYSRNNEEYSTSLTPLTIEDKDIFGNIIERKTIGITSVNIKELRQSSFFGAVSLSVSETYHTMCLTIKALFQIIVGKRSVNEIGGPIKIAKYSGQSAKKGFIMVLYFMAIISANLAAINLLPIPLLDGGHLFHYIIEAVIRRDLSLKYQKYAATFGASVLFLLMAIAISNDIRHLF |
3WKM Chain:A ((96-177)) | --------------------------------------------------------------------------------------------------------------------------------------------------KPVVGGVKKGSPADQVGIKPGDLILEVNGKKINTWYELVEEVRKSQGKAIKLKILRNGKMIEKELIPAKDPK-------TGTYFIGLFPKT----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37787 for 572 contacts (-66.1/contact) +
2D Compatibility (PS) -8684 + (NN) -2774 + (LL) 22616
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -31029.0 ( -54.25 by residue)
QMean score : 0.432
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