Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIIIDGKKIASGLCEKLSQRIDVLKREHSIFPCLKVIFVGNNPASQVYVRNKQKKAESIGISSETIVLPDNILENELIEKINELNNDRFVNGILVQLPLPNHINASKVINTVSVEKDVDAFHRENVGKLVKGEKNCLVPCTPKGALHLIKLVETNLSGKNAVVIGRSNIVGKPMFHLLLQENCTVTILHSQSKDLAEYCSKADVVVTAVGKPNFVQEGWIKEGAIVIDVGINSVSIEGKTKLIGDVDFDRVKEKTKAITPVPGGVGPMTIAFLMINTVIAACLQKKVDASDFVS
4B4V Chain:B ((22-298))
MALVLDGRALAKQIEENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMGEA-AYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWIKQGAVVVDAGFHPRDGGG----VGDIQLQGIEEIASAYTPVPGGVGPMTITTLIRQTVEAAEKALG--------
General information:
TITO was launched using:
RESULT:
Template:
4B4V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -217070 for 2427 contacts (-89.4/contact) +
2D Compatibility (PS) -29741 + (NN) -10015 + (LL) 1016
1D Compatibility (HY) -22800 + (ID) 5600
Total energy: -284210.0 ( -117.10 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_4B4V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B4V-query.scw
PDB file :
Tito_Scwrl_4B4V.pdb
: