Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPEKTESTGLVLNIESPILIILCILSVAYFIYSEYSVEFTKKISKNDPFSRALKNRNKLFKRFFMIR
2BG9 Chain:C ((221-249))
---IRRKPLFYVINFITPCVLISFLAALAFYLPAESGEKMSTAICVLLAQAVFLLLTSQRLPETALAV
General information:
TITO was launched using:
RESULT:
Template:
2BG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8746 for 117 contacts (-74.8/contact) +
2D Compatibility (PS) -2743 + (NN) 2421 + (LL) 188
1D Compatibility (HY) -4800 + (ID) 250
Total energy: -13930.0 ( -119.06 by residue)
QMean score : 0.217
(partial model without unconserved sides chains):
PDB file :
Tito_2BG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BG9-query.scw
PDB file :
Tito_Scwrl_2BG9.pdb
: