Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIVPKEMRDYTIGSGRSLLDIITEYFQELCEKSGFIKKEYRIERNVDNTFVLDRRVNEPAVTN------NRKEIS
2KXE Chain:A ((1-72))
----MDEFVKGLMKNGYLITPSAYYLLVGHFNEGKFSLIELIKFAKSRETFIIDDEIANEFLKSIGAEVELPQEIK
General information:
TITO was launched using:
RESULT:
Template:
2KXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13015 for 403 contacts (-32.3/contact) +
2D Compatibility (PS) -6998 + (NN) 914 + (LL) 780
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -21169.0 ( -52.53 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_2KXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KXE-query.scw
PDB file :
Tito_Scwrl_2KXE.pdb
: