Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSAVIVKPKRNVFAVLDIGTTKIICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAGCGILSFNVHNEIIAANHEISDRDIKRVIFQTFEKYIEENVIIHNIPLRYHLDDMTDIREVSGLYGKRLSADVNVVTASRPALTNIENCITNNSGISMAGCIASAYSAGFACLSEDEKELGTAIVDIGGGCTAIGIFKRSKLI-----YANSIPIGGVHITRDIAYGLCTSI-------------------EHAERIKILYGSTVVTSIDENEYITVQSN------ENDEQARIPKSELVDIIRPRIEEILELVKEQFRK---QKDPINKVVITGGTSRLASMKEIASYIFNKQVRIGCPESYGGLDGEYNKNPVFSAAIGSIKLIVDTFYKNNPDMLGQDGKISKLYHWVKSKVTV |
| 2V7Y Chain:A ((122-351)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------DAQRQATKDAGR-IAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQ------TQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHK-------------GVNPDEVVAIGAAIQGGVIAGEVKDVVLLDVTPLSLGIETMGGVFTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72057 for 1423 contacts (-50.6/contact) +
2D Compatibility (PS) -20692 + (NN) -2326 + (LL) 12104
1D Compatibility (HY) -1200 + (ID) 1700
Total energy: -85871.0 ( -60.35 by residue)
QMean score : 0.338
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