Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLLTGELTSSVRQYLPHSLVLKDHGINKLAEKMKNELNEELEHANKLAERILLLKGVLNFQDTNEISKYDRKFIKDTIRKILEDNLKLEREGIKDYKEAISVAEKERDFVSAILLEEPLKNEEEHFPLD
4E6K Chain:B ((11-131))
LNKILGNELIA-INQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGKL------LIGENTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYL
General information:
TITO was launched using:
RESULT:
Template:
4E6K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9133 for 860 contacts (-10.6/contact) +
2D Compatibility (PS) -13302 + (NN) -9365 + (LL) 188
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -44412.0 ( -51.64 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_4E6K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E6K-query.scw
PDB file :
Tito_Scwrl_4E6K.pdb
: