Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVDSHCHLIYFS-DDEIPEVISRAEQNGVKILHNICVNADDVPKLLKIASSYN---QV-YSSIGIHPLDASVENGKCMHADELVELIKNQKVVSIGETGLDFYKSN-NKSNQKKSFASHIEAARITGLPLVIHTRGVDSEVIDMLKSEMKNGPFNGVM-HCFTSSKELAHQSIDLGLYISFSGIITFKN-ASLLRRIAQDVPRERVLVETDAPYLSPEPHRG----KKNEPAMVKYVVDCLAELWSASPDKVAEVTTNNFFRLFTKLKLKEIL |
| 3RCM Chain:A ((2-268)) | QLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDS--ERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDASERLLAILKDY-RD-HLTGAVVHCFTGEREALFAYLDLDLHIGITGWICDERRGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVALHRGESAEHTAAHTTATARDFFQLPAENHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160372 for 2205 contacts (-72.7/contact) +
2D Compatibility (PS) -27348 + (NN) -10721 + (LL) 288
1D Compatibility (HY) -8000 + (ID) 3300
Total energy: -209453.0 ( -94.99 by residue)
QMean score : 0.611
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