Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGNLSGTVDEVYGDHIILNVNDVGYIIYLSAKALNVCYIGSKIKLLIETCANNRENTTQLYGFINKEEQSCLRLLVKVSGVSYKTAMSILSKL---TPEQLFLAIMNEDKIAL-KISGLGPKLINRIITELSGKVSKLETNNNNFYPINEDAVSALINLGYEKTKVYDTIKKYKPNLDTKDIIRTALKELSNYEIDIMQ
3B0X Chain:A ((61-149))
---------------------------------------VGPDLAEKILEFLR--TGKVRKHEELSRKVPRGVLEVMEVPGVGPKTARLLYEGLGIDSLEKLKAALDRG---DLTRLKGFGPKRAERIREGLALAQAAGKRRPLGAVLSLARSLLEAIRALPGVERAELCGSARRYKDTVGDLDFLVASREGERAVEGFV
General information:
TITO was launched using:
RESULT:
Template:
3B0X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58245 for 492 contacts (-118.4/contact) +
2D Compatibility (PS) -9054 + (NN) -2437 + (LL) 2788
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -69948.0 ( -142.17 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_3B0X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B0X-query.scw
PDB file :
Tito_Scwrl_3B0X.pdb
: