Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPAKDILLQ--SSFLFVRGNHENCDRAYEGWFRYLDSHPFSSEKCENFVPGWFLDIGPMKFFIFDSSSGEDIFTTQSTIDAFEKQFDKLTQDSSDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPN-NVATIVSGHIHIAQILLMNNVPDQIIVGNGGALLHAQDQEPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNHEFTFYDQNNEEMYSAKLTEDFKLEIN |
3IB7 Chain:A ((16-310)) | -------------------------------------LRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSG-----------------------------------------------------LRPDAIVFTGD----------------LADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSMAPLD---------RVCMIDGLRIIVLDTSVPGHHHGEIR--ASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTV----ELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTRGR---DGAQGCNLVHVYPDTVVHSVIPLGGGETVGTFVSPGQARRKIAESGIFIEPSRRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104116 for 2355 contacts (-44.2/contact) +
2D Compatibility (PS) -31691 + (NN) -10396 + (LL) 8444
1D Compatibility (HY) -800 + (ID) 1850
Total energy: -140409.0 ( -59.62 by residue)
QMean score : 0.281
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