Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MFIGNRNRNKVERAISEIRRGLPI-------IIYDKSNYLLVAAAETLEKDLFNQYGLISGKIYVILPSSKVTCISQNVEHSSKRLL--------INNFDELFHLVNCSKEDHTKELQRSKAIDECAITLLKSSELLPYALVVDVNFKDEYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKTPLFLKQTQKVNIISYRTCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKK---IQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF |
4Z9N Chain:A ((9-328)) | ADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINS----------ALQLSGASICVQAGTTTELNMADYFRANK-------MEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLA-LANPDDHVILPEIISKEPFGLTVR------QGD-------------ARWADVVR-----WTHNALLNAEEYGITQA----NVEEMKKSDNPDIKRLLGAEADTK-------IGTDLGLDKDWVVKIIKGVGNYGEIFERN---IGSGSPLKIARG--LNAQWNKGGLQYGIPVR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68861 for 2542 contacts (-27.1/contact) +
2D Compatibility (PS) -31563 + (NN) -2138 + (LL) 3804
1D Compatibility (HY) -3600 + (ID) 2300
Total energy: -104658.0 ( -41.17 by residue)
QMean score : 0.175
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