Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGS-VCTRACAFCNVATGI-----PNKLDPHEPENLAKAIKK---------------------LNLKYVVIT-SVDRDDLPDGGASQFIKCIEEIRKITPETTVEILTPDFLNKKGAFEAIAVASPDVYNHNIEMV-PRLYARIRPR--ARYFHSLYLLKMVKQINPK-LLTKSGLMVGLGETKEEVLQVMDDLRSAEVDFITIGQYLQPTPKHAKIDRYVTPEEFEHYKYIAYS-KGFLVVASSPLTRSSYHAEEDFNRLKACR |
2Z2U Chain:A ((50-288)) | ------------------------------------------------HRCIQCTPSVIWCQQN----------SQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAISLSGE-PTLY----PYLDELIKIFHKN--GFTTFVVSNGILTD-----VIEKIEPTQLYISLDAYDLDSY----GGKKEYWESILNTLDILKE--KKRTCIRTTLI---RGYNDDILKFVELYERADVHFIELKSYM----------DMLQHDEILKLAKMLDENSSYKLIDDSEDSRVALLQNENRKINPKL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z2U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57697 for 1288 contacts (-44.8/contact) +
2D Compatibility (PS) -18272 + (NN) -4343 + (LL) 4816
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -86596.0 ( -67.23 by residue)
QMean score : 0.353
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