Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQLALMDDNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVYSTSSFKDDNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVKSLREYYRDK--LLMIDANLNVDQVKQEIESKISCSLV
4IKE Chain:B ((1-198))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALI-EEVFPKHGNVIFDGFPRTVKQAEALDEML-EKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKY--------NPPPPGVKVIQREDDKP-EVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVIGDGN-
General information:
TITO was launched using:
RESULT:
Template:
4IKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101891 for 1454 contacts (-70.1/contact) +
2D Compatibility (PS) -20884 + (NN) -5069 + (LL) 724
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -142670.0 ( -98.12 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_4IKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IKE-query.scw
PDB file :
Tito_Scwrl_4IKE.pdb
: