Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIENNLQDLKRKFNYIERKLENPTNLS-QKEFINLSKEYSELRPIIKIINEYDTLKKEILDLEEIIKD-ENSEYDIKELAKEEFFEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVE-EVDFKIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEIERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHQLEQIIKEGELDEFIEVLISRNEAERLAGES |
| 1GQE Chain:A ((25-363)) | ----LDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFN--EAVAEL-DALEEKLAQLEFR----RMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAME-DNKSDIGWGSQIRSYVLDDSRIKDLRTGVETRNTQAVL-DGSLDQFIEASLKAGL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 94613 for 2376 contacts (39.8/contact) +
2D Compatibility (PS) -33930 + (NN) -5890 + (LL) 2512
1D Compatibility (HY) 8000 + (ID) 1800
Total energy: 63505.0 ( 26.73 by residue)
QMean score : 0.172
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