Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSEKIELIFEKLKQSNPI---PKIELSYTNHFTLLVAIVLSARTTDVSVNKITKELFSIANTPEKMLNLGQSELKKHISSIGLYNSKAKNIIELSRILVERHTSKVPTNFDDLVSLPGVGRKSANVFLNSGLGIPTLAVDTHVFRVSNKIGLVKEK-----DVFKTEKSLLNVVPKKYLLYAHHWLVLHGRYVCKAQKPSCKTCIIHDLCEFECKRYKV
3FSP Chain:A ((11-223))
---FPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAE
General information:
TITO was launched using:
RESULT:
Template:
3FSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101866 for 1620 contacts (-62.9/contact) +
2D Compatibility (PS) -21346 + (NN) -10312 + (LL) 76
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: -141948.0 ( -87.62 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_3FSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FSP-query.scw
PDB file :
Tito_Scwrl_3FSP.pdb
: