Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLLKPKKSLGQNFILSSEITKRIVVLAGNLEDFNVIEIGPGYGALTKEILAHNPKSLLAIEKDSNLVKCHDQLLNEH-QGKFRIVEADALYVVEEELIERPVKVIANLPYNISLALFLKWLNKIKLFTTFTLMFQKEVADRIIARPNSKDYGSLSVLSQLLCDIRREFDIEPKEFFPRPKVYSSVITVKPLPTQRFAVNLEALTKLTRAVFAQRRKMLRNSLQNVTNR--------------------------TETALENAKLSGNERPKNLTVEQFCLLANNM |
2H1R Chain:A ((2-268)) | --------------HLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEV----AIKTVFP----KFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKESSF-LTNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNWCTLNKQVPVNFPFKKYCLDVLEHLDM-CEKRSINLDENDFLKLLLEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112489 for 1829 contacts (-61.5/contact) +
2D Compatibility (PS) -25858 + (NN) -16152 + (LL) 2088
1D Compatibility (HY) -17600 + (ID) 3050
Total energy: -173061.0 ( -94.62 by residue)
QMean score : 0.517
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