Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLP-GNIELNSNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERTH---ETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQCK---SRLPIHGEYTVAYEPIWAIGTGHVPSNNAIAEVIEVIQSY---------TSKKHVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY
1HTI Chain:B ((6-236))
--FFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPEFVDIINAKQ----
General information:
TITO was launched using:
RESULT:
Template:
1HTI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110071 for 1755 contacts (-62.7/contact) +
2D Compatibility (PS) -23298 + (NN) -10154 + (LL) 260
1D Compatibility (HY) -14000 + (ID) 4100
Total energy: -161363.0 ( -91.94 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1HTI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HTI-query.scw
PDB file :
Tito_Scwrl_1HTI.pdb
: