Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNNPNIKLLYIRDLFAKECKEIEEYCILGKKQHIQISPEEGKLLSLFIKIHKVRSIVEIGTLYGYSSICMAKALPEYGHIYTIENNPKHFKIAKKNFNAFNMSNKITLIVGNALEKLAELSAKAPYDMIFIDADKAGYPKYLDWAESYIKQDGLIVADNTLLLNTVFLKSPPKEVLEKSWRAMREFNYRLSDEKKYCSILIPTDEGMTIALKLT
4OA5 Chain:D ((48-227))
------------------------------------QLGTVEGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDEHPTEKVSSNAHASMRAFNDELANKEKYLSTIIPTSEGMMVSIKLT
General information:
TITO was launched using:
RESULT:
Template:
4OA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118662 for 1480 contacts (-80.2/contact) +
2D Compatibility (PS) -19562 + (NN) -6919 + (LL) 3120
1D Compatibility (HY) -21600 + (ID) 4250
Total energy: -167873.0 ( -113.43 by residue)
QMean score : 0.674
(partial model without unconserved sides chains):
PDB file :
Tito_4OA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OA5-query.scw
PDB file :
Tito_Scwrl_4OA5.pdb
: