Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVLVIGSGGREHAL-LWTLKKSPILTELYITPGRPAMGNLGVLVNIN-IQNSIDMTRFCKRENIELVIIGPEQPIIDGLADNLVAEGINVFAPSQAAAKLEASKSFTKGICKQYGIPTAKYECFVDERLAKSFVRSNKIKFPLVVKANGIAAGKGVIVCNTENEAFSAIDSMLVEKKFGESGEEIIIEEFLVGEEVSFFALVDGLKVVTLGCAKDYKRVDENNDSRNTGGMGSYSSPSIISKDMEQKIIQ-RIIYPTIQALANMGTPYRGVLFAGLITCKDSPKLLEYNVRFGDPEAQSMLPRFDASCDLLELMLSVAKGKLSAKTVELNSKATVCVVVASKGYPGDYQKGEIIKGLAK-IES-IPGVLVFHAGTKLDESGNWVSDGGRVLNIVGEGNTLEEAKSKVYSALNFLEWPGGFFRYDIGS |
| 2IP4 Chain:A ((1-408)) | MKVLVVGSGGREHALLWKAAQSPR-VKRLYAAPGNAGMEALAE--LVPWNGDVEALADWALAEGIDLTLVGPEAPLVEGIADAFQARGLLLFGPTQKAAMIEGSKAFAKGLMERYGIPTARYRVFREPLEALAYLEEV--GVPVVVKDSGLAAGKGVTVAFDLHQAKQAVANILNR----AEGGEVVVEEYLEGEEATVLALTDGETILPLLPSQDHKRLLDGDQGPMTGGMGAVAPYP-MDEATLRRV-EEEILGPLVRGLRAEGVVYRGVVYAGLMLTREGPKVLEFNARFGDPEAQALLP-LL-ENDLVELALRVAEGRLAGTRLSWKEGAAACVVLAA---PGYPE--SPRKGIPLHVPEPPEGVLVFHAGTR-REGGRLVSAGGRVLNVVGLGRDLKEALERAYAYIPQVGFPGAVYRRDIGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237121 for 3575 contacts (-66.3/contact) +
2D Compatibility (PS) -44832 + (NN) -27565 + (LL) 1632
1D Compatibility (HY) -30400 + (ID) 8200
Total energy: -346486.0 ( -96.92 by residue)
QMean score : 0.506
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