Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNSQLNYPITIELDDIKDTKLKLIKIVARLINKRYRTQKKAAIALKIDQPKVSQINKSKIEGFSLEYLLNLLVALDQDINMKIKHNSQHNIQ
3KXA Chain:A ((69-132))
-----------------------GGETFVSLRMKKGFTQSELATAAGLPQPYLSRIENSKQ-SLQDKTVQKLANALGVSPLEVRAAFERRYEY
General information:
TITO was launched using:
RESULT:
Template:
3KXA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12501 for 425 contacts (-29.4/contact) +
2D Compatibility (PS) -6890 + (NN) -4549 + (LL) 1628
1D Compatibility (HY) 2800 + (ID) 750
Total energy: -20262.0 ( -47.68 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_3KXA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KXA-query.scw
PDB file :
Tito_Scwrl_3KXA.pdb
: