Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLSKYKNQSVAVFGLGKTGLSVINVLIKSG-AKAYAWDDSKEQMANAKTM-YKECNFIHPKKYDWHEIKALILSPGVPISYPKPHWIVKLARSFDCKIKSDIELFLEAKAKNQKIVGVTGTNGKSTTTSLIGHILKSAGKKVAIGGNLGVPILDLEKDAEIYVIEISSFQLELINMPAVIPVHDHTFFSGSQYRAAWMIKRVSEMTKKMTEVTKRMAGMIKVDISVLLNITLDHIDRHGSMENYIAVKSKLIGGSKVAVIGCDNEITADIFNKFTGNKIPISGVRSLLDDKKGAEIQEISLKLENHNLSASDAKINLTSNAENIAASCAVCKLLKVDSSTIIDGIKSFSGLKHRNELLGKIENVLFVNDSKATNAESSKKAILSYKNIYWIVGGRSKEGGIESLSKHFARIRKALLIGESTEVFASTMENKVDYVRCCNLEDAFRLAFEEAIKSKEKTTILLSPACASFDQWRNFEERGEAFCRMFEKLRDSFTITRVV |
| 5CDG Chain:B ((191-246)) | ------QGSTCAVFGLGGVGLSVIMGCKAAGAARIFGVDINKDKFAKAKEVGATEC--VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CDG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23586 for 345 contacts (-68.4/contact) +
2D Compatibility (PS) -5650 + (NN) -1494 + (LL) 21732
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -14898.0 ( -43.18 by residue)
QMean score : 0.800
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