Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLGPIIENWHEWLRCYRSYSSNTLESYMRDLKDFISFLSAHIGEEVNVGSLEKLSVPELRSWFSFRYARGINARSNTRALSVIRNFFKYIKNNYEVNNEAVFSLSRPIQRRTLPKALSISDIKTLVDFFLHNYSLQETHSSLSFQYATKKKESVLSTQLYKHCNFSLPGFQCSDTRKLIINKRTLSIKNWIPVLSIGTTEGNTKTSVKEIKLLDLGEPWIIKREIAIIVLLYGTGLRISEALNLKVSDIS-NESLIVTGKGDKQRQVFILPVVKMFIQEYVKACPYLSVNNEAQHLFVGVRGKKLGRTYVANRLQKIRRMLNLPEIVSPHAFRHSFATHLLQENVDIRFIQQLLGHSSLETT-QVYTHLNYQDVFNMYKNFQQSLEKDKKLKL |
| 3VCF Chain:A ((196-333)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENVYFIYRIALESGVRLSEILKVLKE-PERD----ICG--NDVCYYPLS---------WTRGY------KGVFYVFHITPLKRVEVT--KWAIADFERRHK--DAIAIKYFRKFVASKMAELSVPLDIIDFIQGRKPTRVLTQHYVSLFGIA-KEQYKKYAEWLK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57362 for 965 contacts (-59.4/contact) +
2D Compatibility (PS) -14452 + (NN) -3247 + (LL) 17912
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -63899.0 ( -66.22 by residue)
QMean score : 0.412
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