Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHRYDVVVVGGGHAGCEAAAAAARLGASTLLITHKISTIGEMSCNPAIGGVAKGIVVREVDALDGIMGRAIDQASIHSVILNSSRGAAVWGPRAQADRKLYKKAIQEIILNHDNLTVKEESVDDFLIESNSNGEPYIKAIITSSGKQILTSKVVLTTGTFLQGMVHIGEQTTPSGRMGDKSAVE-LANTLKKYDFKLGRLRTGTPPRLDRSTINWSILEEQVGNNPPMPFSYLTEKI-NQPQVSCFITYTNENTHRIIQANLHRSASSYLNDIVAPRYCPSIEAKVKKFAEKNSHQIFLEPEGLDNITVYPNGISNSLPIEVQREMINSIKGLENAEILRPGYAVEYDYIDPRELFHTLETKKVKGLYFAGQINGTTGYEEAAGQGIIAGINAALSASQKKESFVLHRTDSYIGVMIDDLVTKGVTEPYRLFTSRAEYRLAIRSDNADRRLTQKGYNISLVSYKRYSALQNKLKSIKQLEEKLESLKITPEQLRFCGIKISHDGIRKT-----ALDLLSYPNIDWNKLQEIWPELTNVTRWNDNKADQTVIQVVDTRIQKKNADSSVTRWNDKTGYWNDSKTTSNTIKNEICEAVAIEAKYKPYLVRQEADMKFLREEMNTQIPTNFNYSQIKGLSSEVIEKLQAIKPATIGIAKQIQGITPAAIVSILVYLRNRKTKVAANSA |
3CP8 Chain:B ((20-639)) | -HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTV--IGVSANSG---KFSSVTVRSGRAIQAKAAILACGTFLNGLIHIGMDHFPGGRSTAEPPVEGLTESLASLGFSFGRLKTGTPPRIDSRSVDYTIVTEQPGDVDPVPFSFSSTSVANRNLVSCYLTKTTEKTHDILRTGFDRSPL-FTG-------CPSIEDKISRFPDKSSHHIFLEPEGTDTVEMYVNGFSTSLPEDIQIAGLRSIPGLEEAKMIRPGYAIEYDFFHPWQIRSTMETRPVENLFFAGQINGTSGYEEAAAQGLMAGIN-AVRKILGKELIVLGRDQAYIGVLIDDLITKETKEPYRMFTSSAEHRLILRHDNADLRLRKIGYDCNLVSSDDLHRTESIIKRVQHCLEVMKTAKVTPAEINTL---LMNKGLQELKTPARALSLIKRPGI---SLQDIL-------------------------------EHSLSVRSAAEELCNDPR---------VAEQVQIEIKYEGYIKREQLVADRIARLDSLHIPDNFNYDSLNSLSSEGREKLLKHRPATIGQASRILGVSPSDVSILMIRL------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -258008 for 5396 contacts (-47.8/contact) +
2D Compatibility (PS) -65260 + (NN) -23293 + (LL) 3904
1D Compatibility (HY) -48800 + (ID) 13450
Total energy: -404907.0 ( -75.04 by residue)
QMean score : 0.434
|
|
|