Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDSSYMCASNAFIPRISYSRSIDLKDSLLDLVKVQKESYKSFTPGNHGNERLESIFRSVFPINDPLHRATIEFISCRIDNPKYDESECIKRGITFSARVIASIRLVIMQDGISLDEYKSIKGSGDHSKLSTIIKFIGEQEVHFCELPMMTDKGTFIINGVEKVIVSQMHRSPGVFFDSDKGKTYNSGKLIYSARVIPYRGSWLDIEFDVKDLLYFRIDRKRKLPISVLLKALGLSNSDILDRFYEKIKYIKYKNSWKVPFVPDKFKGVRLPFDLMDVEGNVLFKANVRITSRLAKKLHDDELKEYLVPFDSICGLFLAEDLIDSVSSTKILSAGESIKIEDVKKLELLSIGEISVLNIDNLSVGPYILNTLFLDENMSYQDALYEIYKVLRPGEVPVLEIVEEFFHNLFFNPEYYDLSNIGRLKLNSYLGLDYDEDLTVLTHEDIIEIVRKIVLLRDGQGSVDDIDHLGNRRVRSVGEFIENQFRAGLLKLERAVIDSMSTSSLDKVSSPDFINPKVLTNVLRDFFNSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRDRAGFEVRDVHPTHYGRICPIETPEGQNIGLINSLAIYARVNKYGFIESPYRKVINRVATDQIEYLSAIDEGLYYIADASAKLDNNNRFIDDMLYCRYAGNFVMVSSDQVSYIDVSPKQVISVAASLIPFLENDDANRALMGSNMQRQAVPLLKPTAPLVGTGIESFVASGSGAVVLAKRDGIVDSSDSNSIVIRAFDEERVNYLGVDIYHLKKFQRSNHNTCINQKPLVRIGDYVKEGDVIADGPAINSGELALGQNLLVAFMSWQGYNFEDSIIISSEIVKKDLFTSIHIEEFECVVHDTPLGSEKITRAIPGVNEENLYHLDNSGIVKIGTRVGPGYILVGKITPKPSLLLPPETKLLMTIFGEKSFDCADSSLYTSPDVEGTVIDVQVFTRRGVEENERALLIKQKEMNDLEKERDYIINVASEYFYDELKKLLVHSCSQDQEKLDAIEREQWWGIGLKNRSISEQVKNLKKDFDKKVSNTIAQFKQKVEKLDEGYDLPQGVLMSVKVFIAVKHSLQPGDKMAGRHGNKGVISRVVPVEDMPYLEDGTPVDIILNPLGVPSRMNVGQILETHVGWACKKLGERVGNILDEINKINSDFCKEIRSLDDNNFAKFAAVYFDNKKTEEVRDDEITDSLVNIPNKGLLNDELNALVENYLNSCKSAYDNLRSFLIEVYSCGSDVSICNNIRDISNSNLIEFAHKLRNGIPVAAPVFEGPKDKNIIKLFTLAGLDPSGQTEAYDGRTGEKFDRKVTVGYMYMLKLHHLVDDKIHARSVGPYSLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYTLQEMLTVKSDDINGRVKIYESIIKGDSNFECGTPESFNVMIKELRSLCLNVALKQNNVVIEDISHTNIAQSFDKIGISIASPENIKSMSYGEVKDVSTANYRTFKVEKGGLFCPKIFGPVNDDECLCGKYKKRRHRGRICEKCGVEVTSSKVRRERMGHIELASPVAHIWFLKSLPSRIGALLDMSLRDIENILYSDNYIVIDPLVSPFEKGEIISEKIYNEAKDDYGIDSFVAMQGVEAIRELLTCLDLHQIRKDLRLELESVASEIRRKKIIKRLRIIENFIKSGNRPEWMILTTIPILPPDLRPLVSLESGRPAVSDLNHHYRTIINRNNRLRKLLSLNPPEIMIRNEKRMLQEAVDSLFDNSRRN-ALT--NKAGAIGYKKSISDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPALKLNQCGLPKRMALELFKPFVYSKLKLYGMAPTIKFASKLIRAEKPEVWDMLEEVIKEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPISLEAQLEARVLMMSTNNVLSPSNGRPIIVPSKDIILGIYYLTLQEQTDKEGDDLPFLGTFGEVEHSLSDGTLHIHSSIKYRI-EY-TNSEGETCYKTI--RTTPGRLILWQIFPKHENLNFDLVNQVLTVKEVTSIVDLIYRNCGQSATVEFSDRLMVLGFEYATFSGISFSRCDLVIPETKAEHVDHARGEIKKFSMQYQDGLITRSERYNKVIDEWSKCTDMIANDM---LKSISVYDRNSK------YNSVYMMVNSGARGSTSQMKQLAGMRGLMTKPSGEIIETPIISNFREGLNVFEYFNSTHGARKGLADTALKTANSGYLTRRLVDVSQNCIVTKHDCKTKNGLVVRATVEGGTIVASLESVVLGRTAANDIYNPVTKELLVKAGELIDEDKVKQINIAGLDAVKIRSPLTCEVSPGVCSLCYGRDLATGKIVSIGEAVGVIAAQSVGEPGTQLTMRTFHIGGVMTRGVESSNIIASINAKIKLSNSNIIIDKNGDKIAISRSCEVVLIDSLGSEKLRHSIPYGAKLCVDEGKSVKIGDKIAEWDPYTLPIITEKTGTVLYQDLKDGVSITEVMDESTGISSKVVKDWKLYSGGANLRPRIVLLDDNGKVMTLASGIEACYFIPIGAVLNVQDGQKVHAGDVITRTPRESVKTRDITGGLPRVIELFEARRPREHAIVSEIDGHVVFSEKDRRGKRSVLIKPLNEQISPIEYLVSRSKHVIVNEGDFVRKGDLLMDGDPDLHDILRVLGLEALAHYMISEIQQVYRLQGVRIDNKHLEVILKQMLQKVEITDPGDTMYLVGESIDKLEVDKGNDVMSNSGKRPACYLPILQGITRASLETKSFISAASFQETTKVLTEAAFCGKEDPLSGLKENVIVGRLIPAGTGLIMSKVRALSLCDNMDKYEKYFDIEAYDEKLLEDNGCHLHSGKKESVAESRYN |
| 4YFX Chain:J ((16-1362)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFG-DEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPL----KSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMT-RDCVNAKGEGMVLTGP-KEAERLYRSGLASLHARVKVRITEYEKDANGELVAKTSLKDTTVGRAILWMIVPK--GLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLPRVADLFEARRPKEPAILAEISGIVSFG-KETKGKRRLVITPVDGS-DPYEEMIPKWRQLNVFEGERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAA---------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YFX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -446250 for 8813 contacts (-50.6/contact) +
2D Compatibility (PS) -119205 + (NN) -29980 + (LL) 107316
1D Compatibility (HY) -113600 + (ID) 33200
Total energy: -634919.0 ( -72.04 by residue)
QMean score : 0.342
|
|
|