Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLLCEIEYEVRGMENIPKYPFVIASKHQSPLETFIFILLFRNAVFIL-KRELKWIPFIGLHLMALRMIFINRSDGINAMRHIIKLARMRIAENRS-III----FPEGTRTAAKQKTKYQPGI-AALYSVLSVPVLPVALNTGLFWPKSILSMRRNPGKAVIEILPPIYHGLNKNEFLKNLEKTIEERSNKLTAEKN |
| 3SHO Chain:A ((96-281)) | ----DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIRADHVIVVGMGFSAAVAVFLGHGLNSLG----IRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVS-PPARIA--DHVLVAATRGVGHSLSPVGLIAVVNLLLAEIAVRE--PERALAVLREVDRLYREQG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35198 for 1285 contacts (-27.4/contact) +
2D Compatibility (PS) -17507 + (NN) 5526 + (LL) 2004
1D Compatibility (HY) 8000 + (ID) 450
Total energy: -37625.0 ( -29.28 by residue)
QMean score : 0.019
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