Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MNWKLTKTLFIFVFI-LVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPASILNKSVKGIKLEQITGRSK-----------DFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKRVFKGSEYQLSEINSGSVKYEQTYDNFPILNNSKAMLNFNIEDNKAASYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEV--INARLGYYSVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH |
4TWK Chain:A ((14-282)) | TINVMKWKTVSTIFLVVVLYLIIGATVFKALEQPHEISQRTTIVIQKQTFISQHSCVNSTELDELIQQIVAAINAGIIPLGNTSNQISHWDLGSSFFFAGTVITTIGFGNISPR-TEGGKIFCIIYALLGIPLFGFLLAGVGDQLGTIFGKGIAKVEDTFIKWNVS------QTKIRIISTIIFILFGCVLFVALPGWSALDAIYFVVITLTTIGFGDYVAGGSDIKPVVWFWILVGLAYFAAVLSMIGDWLRVISAENLYF------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 58551 for 1308 contacts (44.8/contact) +
2D Compatibility (PS) -24288 + (NN) -4214 + (LL) 1444
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: 19993.0 ( 15.29 by residue)
QMean score : 0.097
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