Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPH-QMMRVVLIEQVYRAFKIMRGEAYHK
1OY5 Chain:A ((83-170))
---------------------------------------------------------------------KPFVLITEPWGEKLNQ-KLVNELSK-----KERIMIICGRYEGVDERVKKIVDMEISLGDFILSGGEIVALAVIDAVSRV-----------
General information:
TITO was launched using:
RESULT:
Template:
1OY5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42699 for 470 contacts (-90.8/contact) +
2D Compatibility (PS) -7899 + (NN) -4983 + (LL) 7204
1D Compatibility (HY) -6800 + (ID) 700
Total energy: -55877.0 ( -118.89 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1OY5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OY5-query.scw
PDB file :
Tito_Scwrl_1OY5.pdb
: