Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQSIPALPVGDIKKSIGFYCDKLGFTLVHHE--D---G-FAVLMCNEVRIHLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEVEGIDELYQHIKPLGILHPNTSLKDQWWDERDFAVIDPDNNLISFFQQIKS
3L7T Chain:A ((6-134))
--VHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCA-PPER-ISWPREACGLRHLAFYVEDVEASRQELIALGIRVEEVR-YDDYTGKKMAFFFDPDGLPLELHE----
General information:
TITO was launched using:
RESULT:
Template:
3L7T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53363 for 784 contacts (-68.1/contact) +
2D Compatibility (PS) -13127 + (NN) -987 + (LL) 896
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -73381.0 ( -93.60 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_3L7T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L7T-query.scw
PDB file :
Tito_Scwrl_3L7T.pdb
: