Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYDDFIVGETFK-TKSLHITEEEIIQFATT-FDPQYMHIDKEKAEQSRFKGIIASGMHTLSISFKLWVEEGKYGEEVVAGTQMNNVKFIKPVYPGNTLYVIAEITNKKSIKKENGLVTVSLSTYNE------NEEIVFKGEVTALINNS
2BI0 Chain:A ((203-336))
-HFDA-GIAGAVLHSTADLVSGAPEL--ARLTLNIAATHHDWRVS-----GRRLVYGGHTIGLALAQATRL--LP-NLATVLDWESCDHTAPVHEGDTLYSELHIESAQAHA-DGGVLGLRSLVYAVSDSASEPDRQVLDWRFSALQ---
General information:
TITO was launched using:
RESULT:
Template:
2BI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38985 for 898 contacts (-43.4/contact) +
2D Compatibility (PS) -12867 + (NN) 3823 + (LL) 892
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -50087.0 ( -55.78 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_2BI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BI0-query.scw
PDB file :
Tito_Scwrl_2BI0.pdb
: