Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MNNKDIYSDDFQNALVDIILNIDKINVKEVFDDSCRA-----VDQDNKKDTLNRSPKDFSINISDIVRYSILCMENLSSDKIEENINMIKNHSSELNDNDMFIQEKNNFTTNFNKFCNALGINIANFKSGKSYVFKPKSLFVLYDILSNNSVYLHFFKNGINDKDIDSSNRIKENLYYFINHEITDQRDYEHALTNYYLYFLVDSNIEIGIKSIII---KIFTEKGITSKDKLQILEYYLDEIDDLNTEISTKIADAHVKNSTNFLENEKVSINSNLAKYITHRDTRASAPKNMLLSLILNSDLVSPKDLEEKELKYPKKITKEHHDKLIKEINKALDYYNDNNTTPSDYFYITSD |
| 1TYG Chain:A ((1-242)) | MLTIGGKSFQSR--------LLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDLSKYTLLP-NTAGASTAEEAVRIARLAKASGLCD---------------------MIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSD----DVVLARKLEE----------------------------------LGVHAIMPGASPIGSGQGILNPLNLSFIIEQAKV---------PVIVDAG----------------------IGSPKDAAYAMELGADGVLLNTAVSGADD------------PVKMARAMKLAVEAGRLSYEAGRIPLKQY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32173 for 1870 contacts (-17.2/contact) +
2D Compatibility (PS) -24225 + (NN) -3213 + (LL) 7972
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -60439.0 ( -32.32 by residue)
QMean score : 0.267
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