Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------MISTSEHSIFKNPAKNDGLRVRTIEVSEKFTSSAQNSDTIKKVVSQNNGHVLPIIAQFLLDNTNDVTSLFQKEDSVFYQLLSTES-SNTGIRMIK---HYATLTTTAHILNQSLDLQLNVSSIKNYLLSYHNETVSERSLADKAMDTIVQFIAENLG-KFSQQTRLANMIQNFGILSLKDDYIEVKIIRNVFDKMLTDSQFEDTKNVIDALDNAGKLVSDRDRKTTKRNAKDDTG------KST-SLVFY-QIKIDLDYADVLGLQSQGRDNVI-QKHSNPSQFKN----TNLEEFMKSENTTLIVF----------------------------------------------------------------------------------------- |
| 4OO2 Chain:A ((18-527)) | TRPLTGEEYLESLRDAREVYLDGSRVKDVTAHPAFHNPARMTARLYDSLHDPAQKAVLTAPTDAGDGFTHRFFTAPRSVDDLVKDQAAIASWARKSYGWMGRSPDYKASFLGTLGANADFYEPFADNARRWYRESQEKVLYWNHAFLHPPVDRSEVGDVFIHVERETDAGLVVSGAKVVATGSALTH-AAFISHWGLPIKDRKFA-----------LVATVPMDADGLKVICRPSYSANAATTGSPFDNPLSSRLDEN---DAILVLDQVLIPWENVFVYGNLGKVHLLAGQSGMI------ERATFHGCTRLAVKLEFIA-GLLAKALD-ITGAKDFRGVQTRLGEVLAWRNLFWSLSDAAARNPVPWKNGTLLPNPQAGMAYRWFMQI----GYPRVLEIVQQDVASGLMYVNSSTEDFRNPETGPYLEKYLRGSDGAGAVERVKVMKLLWDAVGSDFGGRHELYERNYSGNHENTRIELLLSQTASGKLDSYMDFAQACMDEYDLDGWTAPDLESFHAMRSASRDLLGGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11868 for 1784 contacts (6.7/contact) +
2D Compatibility (PS) -26782 + (NN) -3822 + (LL) 2580
1D Compatibility (HY) -10400 + (ID) 2000
Total energy: -28556.0 ( -16.01 by residue)
QMean score : 0.156
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