Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MDIVNIVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFGAPAYSAYIASGLTSSQVFFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLALTLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVANSIVIAFISSIGAFVIKLIQGYIPLYDALFLIIGSIIFAPIGLKLSKKVPNIIQKWIISILIVFAIVQLIL- |
| 4P3F Chain:A ((18-214)) | DSLSLEILQIIKESQQQHGLRHG---------------------DFQRYRGYCSRRQRRLRKTLNFKMGNRHKFTGKKVTEDLL-------------------------TDNRYLLLVLMDAERAWSYAMQLKQEARKRFHLLSRLRKAVKHAEELERLCESN----------RVDAKTKLEAQAYTAYLSGMLRFEHQEWKAAIEAFNK-----CKTIYEKLASAFTEEQAVLYNQRVEEISPNIRYCAYNIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237588 for 1417 contacts (-167.7/contact) +
2D Compatibility (PS) -18939 + (NN) 4595 + (LL) 5740
1D Compatibility (HY) 0 + (ID) 900
Total energy: -247092.0 ( -174.38 by residue)
QMean score : 0.297
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