Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKDVHDLFL-NHVNSNAVKTRKM-MGEYIIYYDSVV-IGGLYDNRLLVKATKSVRHQLQD------NTLVSPYPGAKEMILIPDITE--AINLTNLFELIKNDLKN
2OD0 Chain:A ((3-105))
-----KPILKDSMKLFEALGTIKSRSMFGGFGLFADE-TMFALVVNNQLHIRADQQTSSDFETQGLKPYVYKKRGFPVVTKYYAISSELWESSDRLIEVAKKSLENAKL
General information:
TITO was launched using:
RESULT:
Template:
2OD0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32004 for 600 contacts (-53.3/contact) +
2D Compatibility (PS) -9991 + (NN) -2947 + (LL) 724
1D Compatibility (HY) 1200 + (ID) 450
Total energy: -43468.0 ( -72.45 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_2OD0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OD0-query.scw
PDB file :
Tito_Scwrl_2OD0.pdb
: