Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MKRL-----NTLVLY---------ISFLILIISIVAGCGTGKEAEIKKSFEKTLSMYPIKNLEDLYDKEGYRDDEFDKNDKGTWTISSEMAIQKKGEALNIKGMVLKLNRNTRSAKGFYYVNAIKKDENGRPQDKQIEYPVKMID--NKIIPTKDIKDEKIKKEIENFKFFA-------------QYGNFKDLTKYKGGDISYNPEAPIYSAKYQLTNDDYNVKQLRKRY--DIPTNKAPKLLLKGSGNLDGSSI----GYKKIEFTFVEKKGENTYFTANLHFKPSNDE------------------ |
| 4CFP Chain:A ((15-341)) | DTNGFDILMGQFAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLKNRLKSRS-NGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTQSSFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPS-RSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 69038 for 1778 contacts (38.8/contact) +
2D Compatibility (PS) -26660 + (NN) -5303 + (LL) 4
1D Compatibility (HY) -4000 + (ID) 2300
Total energy: 30779.0 ( 17.31 by residue)
QMean score : 0.141
|
|
|