Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALKSKEDKMIEIRRYLHQHPELSFHEDETAKYIAEFYKGKDVEVET-NV------GPRGIKVTIDSGK-PGKTLAIRADFDALPITEDTGLSFASQNKGVMHACGH-------DAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEVPPGGAKAMIENGVLDGVDHVLGVHVMSTMKTGNVYYRPGYVQTGRAFFKLKVQGKGGHGSSPHMANDAIVAGSYFVTALQTVVSRRLSPFETGVVTIGSFDGKG-QFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMYGVTCTLEYNDDYPALY--NDPEFTEYVAKTLKEANLDFGVE-MCEPQPPSEDFAYYAK-ERPSAFIYTGAAVEDGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN |
| 3RZA Chain:A ((19-394)) | --------GMINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIE-VPKLYLTSHMDTVVPAI-NVKPIVKD-DGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIGAKELNSEL-L-DADFGYAIDASA--DVGTTVVG----APTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQV-----DEITTANIGKFHG-GSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARN----LGLSANTIISGGGSDGSIINTFGIPSVIL--GVGY-----EKIHTTNERMPIKSLNLLASQVLEIIKIVARQ-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -107451 for 3038 contacts (-35.4/contact) +
2D Compatibility (PS) -37581 + (NN) -16132 + (LL) 1608
1D Compatibility (HY) -5600 + (ID) 3100
Total energy: -168256.0 ( -55.38 by residue)
QMean score : 0.458
|
|
|