Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTVNPFDNVGLSALVAAVPIILFLLCLTVFKMKGIYAALTTLVVTLIVALFVFELPARVSAGAITEGVVAGIFPIGYIVLMAVWLYKVSIKTGQFSIIQDSIASISEDQRIQLLLIGFCFNAFLEGAAGFGVPIAICAVLLIQLGFEPLKAAMLCLIANGAAGAFGAIGLPVSIIDTFNLSGGVTTLDVARYSALTLPILNFIIPFVLVFI--VDGMKGIKEILPVILTVSGTYTGLQLLLT----IFHGPELADIIP--SLATMVVLAFVCRKFKPK-NIFRLEASEHKIQKRTPKEIVFAWSPFVILTAFVLVWSAPFFKKLFQPGGALESLVIKLPIPNTVSDLSPKGIALRLDLIGATGTAILLTVIITILITKLKWKSAGALLVEAIKELWLPILTISAILAIAKVMTYGGLTVAIGQGIAKAGAIFPLFSPVLGWIGVFMTGSVVNNNTLFAPIQATVAQQISTSGSLLVAANTAGGVAAKLISPQSIAIATAAVKKVGEESALLKMTLKYSIIFVAFICVWTFILTLIF |
| 4WTP Chain:A ((33-298)) | ------------GSQTFYGINYGVNENSCPTVDSMKNDFNVLKPY--TNRVRTF------ALSVCNQASLALAATQALGMRIYLGMWIDRPDTFDNEMNALKNILANNDVS-NVDGLIVG-------------------SEVLYR----GDTDPQSLANYIKQVKELVAPHGIKVATADVYY-----------KFPEVVVKELDFLMMNAFPYWEGVTIDNAADTLMSHYDQVVGASLGKPVKISETGWPSAGGNFQSSVASVENENKYLHDVLCRVKQRNIDLLYFSAFDEPYRGGVEAHFGVLGSDRNTKPGITIEAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -342915 for 2125 contacts (-161.4/contact) +
2D Compatibility (PS) -26472 + (NN) 6032 + (LL) 23036
1D Compatibility (HY) -3600 + (ID) 1700
Total energy: -345619.0 ( -162.64 by residue)
QMean score : 0.174
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