Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHIHEHLKLVPVDKIDLHETFEPLRLEKTKSSIEAD---DFIRHPILVTAMQHGRYMVIDGVHRYTSLKALGCKKVPVQEIHETQYSISTWQHKVPFGVWWETLQQEHRLPWTTETRQE--APFITMCHGDTEQYLYTKDLGEA-HFQVWEKVV--ASYSGCCSVERIAQGTYPCLSQQDVLMKYQPLSYKEIEAVVHKGETVPAGVTRFNISGRCLNLQVPLALLKQDDDVEQLRNWKQFLADKFANMRCYTEKVYLVEQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3J9O Chain:B ((79-505)) | ---VIDKLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEVSILDVKKEELQYDFERNLYDISSSDFF--KKVYVSEFD--QYGGEPYGAILGLYNFENTTNDIIWLTGMGMVAKNSHAPFIASIDKS---FFGVKDLSEITHIKSFEALLEHPRYKEWNDFRNLDVAAYIGLTVGDFMLR-QPYNPEN-NPVQYKLMEGFNEFVDYDKNESYLWGPASIHLVKNMMRSYDKTRWFQYIRGVESG--GYVKNLVACVYDNKGILETKSPLNVLFADYMELSLANIGLIPFVSEKGTSNACFFSVNSAKKVEEFVDGFDSANSRLIANLSYTMCISRISHYIKCVIRDKIGSIVDVESIQKILSDWISEFVTTVYQPTPLEMARYPFRNVSIEVKTIPGKPGWYSCKINVIPHIQFEGMNTTMTIDTRLEPELFGTNN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17254 for 1589 contacts (-10.9/contact) +
2D Compatibility (PS) -24862 + (NN) 1332 + (LL) 1092
1D Compatibility (HY) -11200 + (ID) 2250
Total energy: -53142.0 ( -33.44 by residue)
QMean score : -0.032
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