Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK |
| 1P9I Chain:A ((3-31)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLNALLASLEAENKQLKAKVEELLAKVGE------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1P9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4827 for 106 contacts (45.5/contact) +
2D Compatibility (PS) -2978 + (NN) 464 + (LL) 12040
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 12403.0 ( 117.01 by residue)
QMean score : 0.149
|
|
|