Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGF-------------------NFGDLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIR---MAIVSTVLGSIVSIPIALLCASNIVHQKW----------ISIP--SRFILNIVRTIP----DLLLAAIFVAVFGIGQIPGILALFILTICIIGKLLYESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGLVGAGGIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA- |
| 3BXV Chain:A ((1-308)) | MPKPYIAINMADLKNEPKTFEMFSAVGPKVCMVTARHPGFVGFQNHVQIGVLPFGERFGGAKMDMTKESSTVRVLQYTMWKDWKDHEEMHRQNWSYLFRLCYSCASQMVWGPWEPIYEIKYADMPINTEMTDFTAVVGKKFAEGKPLEIPVISQPYGKRVVAFGEHTVIPGKEEQFEDAIIKTLEMFKRAPGFLGAMLLKEI--GVSGIGSFQFGSKGFHQLLESPGSLEPDPNNVMYQAPEAKPTPPQYIVHVEWANLDALQFGMG-----RVLLSPEYREVHDEALDTLIYGPYIRIINPVMEGTFWREYLNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226053 for 1972 contacts (-114.6/contact) +
2D Compatibility (PS) -26759 + (NN) 4624 + (LL) 240
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -253598.0 ( -128.60 by residue)
QMean score : 0.139
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