Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCLNFREDNVMKKIMVIFGTRPE-----AIKMAPLVKEIDHNGNFEANIVITAQHRDMLD-SVLSIFDIQAD-HDL-NIMQ-DQQTLADLTANALAKLDSII--NEEQPDMILVHGDTTTTFVGSLAAFYHQIPVGHVEAGLRTHQKYS----PFPEELNRVMVSNIAELNFAPTVIAAKNLLFE-NKDKERIFITGNTVIDALSTTVQND--FVSTIINKH-KGKKVILLTAHRRENIGEPMHQIFKAVRDLADEYK--DVVFIYPMHRNPK--VRAIAEKYLSGRNRIELIEPLDAIEFHNFTNQSYLVLTDS-----GGIQEEAPTFGKPVLVLRNHTERPEGVEAG-TSRVIGT-DYDNIVRNVKQLIEDDEAYQRMSQAN----NPYGDGQASRRICEAIEYYFGLRSDKPDEFVPLRHK |
| 3C48 Chain:A ((19-430)) | ---------SHMRVAMISMHTSPLQQGMNVYILSTATELAKQ-GIEVDIYTRATRPSQGEIVRV-AENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYW-LSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPG---TERSR-RELGIPLHTKVVAFV-GRLQP-FKGPQVLIKAVAALFDRDPDRNLRVI-ICGGPS-DTYRHMAEELGV-EKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAAR-VGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANEN------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136396 for 2955 contacts (-46.2/contact) +
2D Compatibility (PS) -38816 + (NN) -16478 + (LL) 1104
1D Compatibility (HY) -3600 + (ID) 3000
Total energy: -197186.0 ( -66.73 by residue)
QMean score : 0.388
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