Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDRFYNWLINQK-IYKEYVENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRVGLIIMVIIQTAVLFTFVKTLPKSNHKIEE |
2KDT Chain:A ((711-753)) | ---------------------------------------------SKLEGSEDSLYSDYVDVFYNTKPYKHRDDRLLQALMDILNEEN---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5206 for 147 contacts (-35.4/contact) +
2D Compatibility (PS) -4120 + (NN) 2149 + (LL) 9060
1D Compatibility (HY) -400 + (ID) 350
Total energy: 1133.0 ( 7.71 by residue)
QMean score : -0.120
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