Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRKRKWLIVICVLLVLITISQILKHFNYGTESKEAYNTYTVEKERQLDLQGKAYPREVKTYYKNNQVGTYLGVQVADGQTVKKGDMLINYKINSNKRQQLVDKINDTQHIITEVYLNITKGLNNREIQKKLIEYKQTLYEAQQQLYQYDSQNRDSMYASFDGKIMIKNIDN---DSDNQPILYLISKESHIKTSVTEFDLNKVKKGDKVNLSITSTGKTGAGIIKQISELPISYEENLSLHENDALHLPESNNDGELANSKSISASPIFKSNNNSELSKYGVIIDDLSLPIRAGYSLEIKVPLNAIKIPKSVLTKGNNVFIVNKNSIVEKRNIRIKRINGDIIVEKGLKPGDKLIKQPKSTMNDGDKVEISS
3VA7 Chain:A ((1166-1235))---------------------------------------------------------DAELLY-SEYTGRFWKPVAAVGDHVEAGDGVIIIEAMKT---------------------------------------------------------EMVVGATKSGKVYKILHKNGDMVEAGDLVAVI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20556 for 464 contacts (-44.3/contact) +
2D Compatibility (PS) -6730 + (NN) 2075 + (LL) 19884
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -7127.0 ( -15.36 by residue)
QMean score : 0.431

(partial model without unconserved sides chains):
PDB file : Tito_3VA7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VA7-query.scw
PDB file : Tito_Scwrl_3VA7.pdb: