Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MTTQM-KIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALVDQLHELIANTDLNKLSYLNLDAFQKRDILAAHYIAKSAIRTKNLDQMTKAKQRLESIYNSISNPLHSQNN----
2HJQ Chain:A ((1-111))
MFTAKLIKGKTYNVMGITFR---------AGVSQTVPKKLYEYLNENPYFILTQELNNQKDDPINYTESELKGMNKAEHESIISNLGRNPSDFKNADERIAYILKQIDNKGELEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2HJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1850 for 623 contacts (-3.0/contact) +
2D Compatibility (PS) -11061 + (NN) 790 + (LL) 652
1D Compatibility (HY) -400 + (ID) 1050
Total energy: -12919.0 ( -20.74 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_2HJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HJQ-query.scw
PDB file :
Tito_Scwrl_2HJQ.pdb
: