Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWSFKSMFNTPEDPEKDAYEFYGKVQPGITTPTQKTCNFVALDLKSKDRDAIKAMFKKWTVMADRMMDGDTVGKTSNNPLMPPVDTGESI-GLGASKLTITFGISKSLMKK-IGLSSKIPDAFKDLPHFPNDQLIDDYSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGFISAKGK-----ETPRNLMAFKDGTINPRKS--NQLKDYVFID-----DGWAKHGTYCVVRRIQIHIETWDRTALEEQEATFGRKRHSGAPLTGGKEFDEIDLKAKDSHGEYIIDKDAHTRLAKEA-----NTSILRRAFNYVDGTDDRTGNFETGLLFIAFQKAT-KQFIDIQNNLGSNDKLNEYITHRGSASFLVLPGVS-KGGYLGETLFD |
3O72 Chain:A ((13-387)) | ------------VARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNP-RLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYAS-DPEGK-GIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNS-GQLDMGLLFVCYQHDLEKGFLTVQKRLN-GEALEEYVKPIGGGYFFALPGVKDANDYLGSALLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106667 for 2954 contacts (-36.1/contact) +
2D Compatibility (PS) -37536 + (NN) -14091 + (LL) 820
1D Compatibility (HY) -28400 + (ID) 6250
Total energy: -192124.0 ( -65.04 by residue)
QMean score : 0.430
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