Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------MKGMFLSSFYATRKQTYIYFIVAIIAAGYFAVFNPLM----------------SSAMAGVMLITPITDNIKHEKDSRWM---YYVSTLPVKRSDYIKSY-FAFYLILFGASLMIG-LVVTTIVTQSVMIG--IMSGLMSFGIIGAYSI--------IFPLTFKFGAENSNVIMIVASILLLF--------------------SFVVFFFIYGMVSGASALEFEKISTEGWLVVIVYAVIGIVITSVSYILSIKIFNKQEL-------------- |
| 4HE8 Chain:C ((2-354)) | TWSYPVDPYWMVALKALLVVVGLLTAFAFMTLIERRLLARFLFVLAPLISVVFALLAFGLIPFGPPGSFFGYQPWVINLDLGILYLFAVSELAVYGIFLSGWASGSKYSLLGSLRSSASLISYELGLGLALLAPVLLVGSLNLNDIVNWQKEHGWLFLYAFPAFLVYLIASMAEAARTYSSIKWALFQMAEYIHFITASALIPTLFLGGWTMPVLEVPYLWMFLKIAFFLFFFIWIRATWFR-LRYDQLLRFGWGFLFPLALLWFLVTALVVALDLPRTYLLYLSALSFLVLLGAVLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170745 for 1527 contacts (-111.8/contact) +
2D Compatibility (PS) -20213 + (NN) 5548 + (LL) 144
1D Compatibility (HY) -17600 + (ID) 1950
Total energy: -204816.0 ( -134.13 by residue)
QMean score : 0.090
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