Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRK-ERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKVKDLVFVDDSVKRYK
4F7V Chain:A ((3-142))
---AYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEM----------------
General information:
TITO was launched using:
RESULT:
Template:
4F7V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98835 for 1054 contacts (-93.8/contact) +
2D Compatibility (PS) -14401 + (NN) -5275 + (LL) 1800
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -131161.0 ( -124.44 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_4F7V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F7V-query.scw
PDB file :
Tito_Scwrl_4F7V.pdb
: